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Project Management Office
… Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists …
Learn more
The Busy World of Deep Sea Eruptions
… thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … and materials. The proposal submission deadline is March 31, 2026 .  … and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … fruit. Yet this plant, native to China and now disseminated around the globe, often as a rootstock for  Citrus , appeals …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … by the Banfield lab in collaboration with the JGI), human microbiomes, natural oil seeps in Santa Barbara, Calif., and …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in algal communities, including the algae-associated microbiomes that influence algal diversity and gene …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …
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JGI@25: From Life at the Extremes to Editing Genomes
… Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV …
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Single Cell Research Group
… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and … project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, and …
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Open Frameworks Training the Next Generation of Scientists
… in 15 individual classrooms across the country, training 316 students in fungal biology, bioinformatics, and … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … biology analysis. KBase also supports  MICROnet (Microbiomes In Computational Research Opportunities …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is … because they’re very productive even in high heat while C3 crops have become less efficient at photosynthesis, a …
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