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The Busy World of Deep Sea Eruptions
… thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, from an international …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to … that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … fruit. Yet this plant, native to China and now disseminated around the globe, often as a rootstock for  Citrus , appeals …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist observations All MycoEd …
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Metabolomics
… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … molecular profiles are generated for metabolites extracted from a variety of experimental samples, including organisms …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and …
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JGI@25: From Life at the Extremes to Editing Genomes
Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in algal communities, including the algae-associated microbiomes that influence algal diversity and gene …
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Single Cell Research Group
… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is … because they’re very productive even in high heat while C3 crops have become less efficient at photosynthesis, a …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… root cells, and both organisms rearrange their cells around this structure to facilitate sharing.  Recently, … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging …
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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