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Open Frameworks Training the Next Generation of Scientists
… program for higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological … microbiology program that provides training and scientific contributions—including sequencing services and analysis—to participants. Over the past two years, Myco-Ed has been …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national … Access to the Molecular Foundry and use of JGI capabilities is … they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for covering the costs of the …
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A multi-omic survey of black cottonwood tissues highlights coordinated transcriptomic and metabolomic mechanisms for plant adaptation to phosphorus deficiency
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you should go back and listen to the Nancy … Alison discuss the basics of genome mining, as we get ready to talk to some of the experts in this area of natural …
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Natural Prodcast Episode 16: Marcy Balunas
… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … what we know is they’re quite selective in some way for antifungal activity. They are also, some of them, are … that we know there are compounds in there that are antifungal and antibacterial. But maybe there are compounds in …
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Sequencing the fungal tree of life
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JGI Portals
… enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. Book a …
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Secondary Metabolites Program
… for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … products and bioenergy crop enhancement. The program aims to tap into the largely unexplored biochemical diversity within … bacteria, fungi, algae and plants. These compounds are key to organisms' interactions with their environments and with …
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Who We Are
… user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff … user facility located at Lawrence Berkeley National Laboratory ( Berkeley Lab ), and part of the Biosciences Area. The … and other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, …
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Selection to sequence: opportunities in fungal genomics
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A genomic perspective on fungal diversity and evolution
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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