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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage … completed. You can view the status of your projects at any time by accessing various reports on the JGI Portal . Use …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of Duisburg-Essen (UDE), Germany with … by IR-spectroscopy and mass spectrometry in sequence in real time at an atomic resolution. We are excited to start …
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Dispatches From JGI Interns
Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from academia, industry, and government organizations for …
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Mining metatranscriptomes reveals a vast world of viroid-like circular RNAs
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Gene Expression: From On-Off Switch to Dial
Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to … the technologies available for other JGI users outside the realm of bioenergy optimization. Summary Life is all about … area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is … Over thousands of years, farmers have selected for cereal plants without this shattering trait – referring to the …
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Events
…   … New Lineages of Life (NeLLi) … Viral EcoGenomics & Applications (VEGA)  …   The JGI is represented at …
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Bacterial Diversity in the Cecum of the World’s Largest Living Rodent (Hydrochoerus hydrochaeris)
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Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans
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Products
… of the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific … and mentor is what we strive for,” Visel said. Practical Applications for Fungi Wint began working on the project … covering the entire kingdom of fungi. “The information from this project may also have a practical relevance with …
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