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Microbiome Data Science Team
… approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et al. (2020) A unified catalog of …
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Examples: Successful LOIs & Submissions
Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities … communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics …
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Workforce Development & Education Outreach
… internship partnership that started in the summer of 2014. … Modeled on the JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  … The CalTeach Summer Research Institute (SRI) at UC Berkeley is a program designed to …
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Frequently Asked Questions: Proposal Submission
… countries (Iran, North Korea, Cuba, and Syria), need DOE permission and authorization from other U.S. government … and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact …
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Plant Program
… plant-microbe interactions, advancing efforts to create renewable energy sources and bolster agricultural resilience. … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these projects. …
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Alabama Agricultural & Mechanical University Internship Program
Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in Berkeley, …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The program’s fungal genomics research explores new metabolic processes and enzymes that can be applied in … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …
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The Genome Portal of the Department of Energy Joint Genome Institute
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year …
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Natural Prodcast Episode 16: Marcy Balunas
I didn’t know how to get towards that.  Organic chemistry doesn’t really help with getting to something other than the … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … the podcast produced by the US Department of Energy Joint Genome Institute, a DOE Office of Science user …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and … matches associated with genes.  … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … …
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