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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … & quality requirements for samples submitted to the DOE JGI. DNA Preparation Guidelines RNA Preparation …
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Natural Prodcast Episode 7: Ben Shen
… think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … What is beautiful for natural products is nature! Nature does this sort of – if you think of nature as a scientist, … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … directly from samples sidesteps these challenges, since it doesn’t require this kind of lab culture. Beginning in the …
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Natural Prodcast Episode 15: Katherine Duncan
… has been really, really fun. Alison Takemura: And then does that also– well, I guess the question really is, do … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting … The Genomics Arms Race Ari Patrinos , Former Director of DOE’s Office of Biological and Environmental Research “There … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in …
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Natural Prodcast Episode 6: Marc Chevrette
… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … all over the world in the next couple of years. DAN: What does it take to become a hub? MARC: We’re still trying to … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research … Berkeley National Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … to predict or just understand better the language of microbial cell-cell communication. And he told us about his … Alison is no longer with us… She’s alive! She just doesn’t work for JGI anymore! [LAUGHTER] AARON PURI: Yeah. …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … bit of entomology as well. DAN: Right. Yeah. No, yeah, Bill does it all. A lot of people I think-- well, maybe I'm …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Natural Prodcast Episode 20: Brian Bachmann
… you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and I’ll … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … Ecopia and collaborators’ landmark genome mining paper: “A genomics-guided approach for discovering and expressing …
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