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Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
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JGI Portals
… to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — … host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database … engagement and data exchange. … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes …
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Virus-Host Interactions and Genetic Diversity of Antarctic Sea Ice Bacteriophages
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Data Ecosystem
… access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level … and understanding. JGI and KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data …
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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Partners
… with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with DOE …
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Genome-wide identification of bacterial plant colonization genes
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Elucidating Bacterial Gene Functions in the Plant Microbiome
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and … of our Community Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission … of almost all plastics. This drives the DOE’s focus on developing lignocellulosic biomass as a clean, renewable and …
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