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Database provides details on river microbes in 90% of US … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the …

As an Integrative Genome Science User Facility, the JGI plays a leadership … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA … draw from the infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant …

CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic …

Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). … diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity.  …

… eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil …