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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other … missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox …
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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … Policy on our Data Policy & Support page.  … Please review our Webinars and Events pages for details.  … Who is …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … in the era of genome-resolved metagenomics. Nature Reviews Microbiology volume 20, 721–736 JC Villada, F Schulz …
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Year in Review: JGI’s 2018 Progress Report Available Now
… highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, … arsenic mobility and to better understand their roles in the global sulfur cycle. Copies are available online – …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … in natural products as an undergrad. So for me, it was studying sort of the interface of chemistry and biology … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence …
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Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats
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Natural Prodcast Episode 22: Alison Narayan
Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural Products meeting earlier this … of them to be highly related to enzymes that we have been studying since day one in my lab that do oxidative …
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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … communities, and samples including state-of-the-art instrumentation and informatic approaches.By bridging genomics … health, and bioenergy development. … EcoFABs:  For studying microbe-host (or plant-microbiome) interactions …
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