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Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin
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Natural Prodcast Episode 9: Roger Linington
… products. So you know, for example, what are all the compounds in a sample set, and how are they distributed? And … zero again in order to solve what might be an already known compound. ROGER:  However, if you had a comprehensive list … technology from UCSD, which is doing pattern recognition in comparing spectras to one another. And community-based …
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A Viral Ecogenomics Framework To Uncover the Secrets of Nature’s “Microbe Whisperers”
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Fungal community response to long‐term soil warming with potential implications for soil carbon dynamics
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… capability to better understand a special class of compounds, or secondary metabolites, called terpenes. … Genomics, the system allows scientists to test enzymatic pathways, which make valuable products, more quickly. In the … Clostridium autoethanogenum. The microbe can utilize carbon oxides, including the greenhouse gas carbon dioxide, …
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Extracting the Secrets of Secondary Metabolites
… them. The Impact Secondary metabolites are microbial compounds produced in response to hardship or competition. … any microbe can serve as the factory for producing chemical compounds of interest. Using CRAGE to domesticate target … understanding its secondary metabolites and their pathways could fuel further agricultural applications for …
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Substrate-restricted methanogenesis and limited volatile organic compound degradation in highly diverse and heterogeneous municipal landfill microbial communities
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Photochemical alteration of organic carbon draining permafrost soils shifts microbial metabolic pathways and stimulates respiration
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Metagenomic reconstruction of nitrogen and carbon cycling pathways in forest soil: Influence of different hardwood tree species
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How Filamentous Fungi Sense Food
… approach to reconstruct and model gene regulatory pathways used by the filamentous fungus  Neurospora crassa, … More importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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New Lineages of Life Group
… to analyze large-scale biological datasets. This work helps uncover patterns and relationships in complex genomic and …
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