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Natural Prodcast Episode 13: Francisco Barona Goméz
… Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … him about more recent work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and … the Nature Chemical Biology — or early this year– this new tool that we call CORASON, which is basically an acronym to …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:     … Laboratory (EMSL) at their joint meeting! “Empowering Automated Laboratories: Integrating Experimentation with Data” was held at the Seattle Marriott Waterfront in … systems using advanced experimental and informatic tools at no cost. The JGI and EMSL are supported by the …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … train students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources empower students … Beyond providing a scalable solution for production of high-quality fungal reference genomes, …
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Simon Roux
… include the development of novel computational tools to identify virus sequences, the design of new experimental approaches … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the … We compare those sequences with our sequence. The premier tool for that these days, the one that pretty much everybody …
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The JGI Data Portal: Improving User Experience
… agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from … — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … submitted to the JGI at any time using a simple web-based form and are reviewed annually. For accepted proposals, …
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization
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Obtaining Comparative Genomic Data with the VISTA Family of Computational Tools
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Virus Discoveries that Keep Getting Bigger
… work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … on giant virus diversity, and how sequencing and bioinformatics have sped up the study of giant viruses. The … approaches. One way of detecting giant viruses in sequence data is read-mapping: using giant virus reference genomes to …
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