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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and … example, the JGI first used CRAGE to engineer domesticated bacterial strains with novel biosynthetic gene clusters …
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Rapid Response of Nitrogen Cycling Gene Transcription to Labile Carbon Amendments in a Soil Microbial Community
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Soil exchange rates of COS and CO18O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
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Photochemical alteration of organic carbon draining permafrost soils shifts microbial metabolic pathways and stimulates respiration
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Metagenomic reconstruction of nitrogen and carbon cycling pathways in forest soil: Influence of different hardwood tree species
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Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest
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50-year fire legacy regulates soil microbial carbon and nutrient cycling responses to new fire
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the …
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Comparative genomic and physiological analysis provides insights into the role of Acidobacteria in organic carbon utilization in Arctic tundra soils
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Niche differentiation is spatially and temporally regulated in the rhizosphere
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Lignin‐modifying processes in the rhizosphere of arid land grasses
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