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Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … University of Utah. I’ve known Eric for a long time – we worked together on Aflatoxin biosynthesis while he was a …
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Natural Prodcast Episode 9: Roger Linington
… back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser … products field as it relates to structure elucidation and genome mining, and how we might start to better connect … were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was working for Bill Gerwick as …
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Fine Mapping of the Bsr1 Barley Stripe Mosaic Virus Resistance Gene in the Model Grass Brachypodium distachyon
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all … project are appropriately recognized and credited for their work, while also adhering to the authorship policies of the … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …
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Workforce Development & Education Outreach
… takes many forms: We offer internship opportunities through working directly with specific universities, continuing education programs in the Bay Area, and established programs … The JGI and UC Merced have had a long-standing internship partnership that started in the …
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SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae
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Genome‐wide scans of selection highlight the impact of biotic and abiotic constraints in natural populations of the model grass Brachypodium distachyon
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley … Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data Generation Platforms …
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N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon
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Data Ecosystem
… users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. Linking the resources of … in a comprehensive, multi-disciplinary way. We also work with our partners to ensure platforms are future-ready …
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