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JGI at the AGU Fall Meeting
Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting … Proposal via FICUS December 13 8:12 am Convention Center eLightning Theater IV: Kuno Kasak, University of Tartu … of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST Convention Center, Poster Hall D-F …
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SIPs with Standards
Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … reusable, and more insightful, for the future of studying microbial communities.   …
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IMG Webinar Series
Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic … But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a duck? For a … Research and operated under Contract Numbers DE-AC02–05CH11231 (JGI) and DE-AC05–76RL01830 (EMSL). This work was funded …
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Training the Next Generation of Talent
Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start … which is best for the task at hand. “There are at least 30-40 programs and it is not clear which are the best to … trillion base data sets on daily basis.” As part of their learning experience, the students had to give a presentation …
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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops … viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … genes were essential to  Y. lipolytica . They identified 1,377, or 17.5 percent, of  Y. lipolytica ’s genes to be …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers … behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … But scientists have wondered exactly how the microbial community carries out its helpful metabolism: …
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Hiroshi Otani
Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. … systematic identification of regulons of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … Tara Oceans Expeditions that took place between 2009 and 2013, the  Chaetoceros genus has been identified as the most … Bushley of the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how …
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