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First Monoploid Reference Sequence of Sugarcane
… and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … diploid species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to produce a … as a reference. The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with …
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Flooding and ecological restoration promote wetland microbial communities and soil functions on former cranberry farmland
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Patterns and ecological drivers of viral communities in acid mine drainage sediments across Southern China
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Characterization of a novel polyextremotolerant fungus, Exophiala viscosa, with insights into its melanin regulation and ecological niche.
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Microbial species and intraspecies units exist and are maintained by ecological cohesiveness coupled to high homologous recombination
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Filling in the Plant Tree of Life
… we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to drive more productive food, medicine, and … swaths of the plant tree of life. One project aims to change that. …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here … efforts with diversity, equity and inclusion in mind. Microbiome ecologist Shade became Director of Research at … collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s …
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're doing with those …
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MGM Workshop at Fisabio Summer School 2026
… research, the health sciences and related fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The workshop will train participants in …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … begin to diverge and mutate relative to one another. This change occurs at a predictable rate, enabling researchers to …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … in overcoming this obstacle when it hit the scene in 2019. Now, that power is poised to grow exponentially by … CRAGE, researchers are no longer limited to using model host microbes; theoretically, any microbe can serve as the …
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