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JGI@25
… for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the …
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2022 Progress Report
Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, …
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Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales
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Fishing for Novel Cellulose Degraders
… led by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence … program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … a regulator of lipid metabolism in microalgae .  Nature Plants 1: 15107 Lupiáñez DG, Kraft K, Heinrich V, Krawitz P, …
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JGIota: The Algae Nicknamed ‘Chlamy’
… shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on … and what it has to teach us about other organisms – like plants. [ Editor’s Note: Merchant is also a faculty …
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New Research Sheds Light on Diversity in the Deep Sea
… microbial communities across five oceanic regions. In doing so, they found a high degree of variability in the … organisms like shrimp and crabs also live near these vents, feeding on the bacteria and other microorganisms that live … are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds … organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants …
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Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Ian Blaby
… functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has … Exploiting algal NADPH oxidase for biophotovoltaic energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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