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Coral mucus rapidly induces chemokinesis and genome-wide transcriptional shifts toward early pathogenesis in a bacterial coral pathogen
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Busting the Unbreakable Lignin
… to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … order to do so is a resource-intensive process. Now, a new study shows how anaerobic fungi — the kind living in the … grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies grants W911NF-09–D-0001 and W911NF-19-2-0026 …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … a limiting factor – before or after flowering. For the study, the team grew two sorghum varieties: one that … to data from additional years of sampling, which are currently being analyzed. All EPICON data collected, along …
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David Goodstein
… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building … team of scientists and software engineers, Dr. Goodstein currently leads the Plant Comparative Analysis group, and is … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … temperatures characteristic for polar oceans. In this study, they’ve cracked open the genome of another polar …
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