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Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on …

Back in 2011, JGI-supported researchers published a paper in the … how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … State University campuses for biotechnology education as part of a course-based undergraduate resource …

The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …

Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … reusable, and more insightful, for the future of studying microbial communities.   …

… and seven graduate students from UC Merced through their long standing internship program. In just two months, the … system for the selection of genes essential for specialized carbon utilization ” Jesica Calderon : “Being a JGI intern … W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great …

Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …

Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work …

Uri Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document … viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be …

In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …

In honor of the JGI's 25th anniversary in 2022, we have … Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … Banfield is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine …