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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … world, encompassing 54 researchers from 14 organizations across nine countries. Learn more about the Hungate1000 work …
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The JGI Data Portal: Improving User Experience
… download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is currently only … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … is to allow scientists to search for specific types of data across organisms, enabling them to conduct more complex …
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Silver age of GOLD introduces new features
… Database has matured from six projects on a spreadsheet into a flagship  genomic metadata repository, making curated … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … GOLD’s strengths has been implementing metadata standards across all entities in the system. The JGI’s  Genomic …
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Len Pennacchio
… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at … is the JGI's Deputy of Genomic Technologies. oClick to learn more about the offerings and capabilities we offer …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are adapting to stresses. A total of 17 proposals have been approved …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of … a total of 44,652 complete or near-complete viral genomes across both datasets, separating these from the vast …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, … — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … in plant research laboratories and plant biology courses across the globe for insights into reproductive, space and …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … diverse lines of sorghum to understand what genes exist across the species. Earlier pan-genomes for other plants, …
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Decoding Yellowstone’s Microbial Mats
… began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each … in workforce development. We have a number of initiatives across several different campuses with this being our …
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