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A Model System for Perennial Grasses
… research programs for developing methods for converting plant biomass into sustainable fuels for cars and jets. By … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and …
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Streamlining Regulon Identification in Bacteria
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi Otani. Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… weather events such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature … Blow, and their team have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied …
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PhycoCosm Tutorial
… analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user …
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First Monoploid Reference Sequence of Sugarcane
… polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … crop that very efficiently converts solar energy into plant biomass, which can then be crushed to extract the … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI was part of an international team led by researchers …
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Extracting the Secrets of Secondary Metabolites
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub willows through the  Community …
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Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … viruses,” said the study’s lead author Simon Roux, a JGI research scientist in the  Environmental Genomics group … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Virus-Microbe Interactions of Mud Island Mangroves
… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … or national user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and … his time with the JGI has shaped his post-graduate school plans. “The SCGSR gave me some great insight into my career …
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Viruses Reprogram Cells into Different Virocells
… The Impact The number of microbes in, on, and around the planet is an astronomical figure, and yet viruses outnumber … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … project. For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a … for example, despite taking up only about 3% of the planet’s landmass, peat moss and their subsurface bogs hold …
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