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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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Draft genome sequence of Clostridium tetanomorphum DSM 4474T isolated from a septic wound
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or … for candidate bioenergy feedstock crops. Summary A plant is like an office building, its roots are akin to the ground … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never … two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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A TXTL-Based Assay to Rapidly Identify PAMs for CRISPR-Cas Systems with Multi-Protein Effector Complexes
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence … Find more details on the instrumentation we use and our methodology for metabolite analyses.  … Read more about our submission guidelines, what you can expect …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . At the …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring behind a city’s power … of where those binding sites are in the genome — those sequences are moving around, disappearing and appearing in …
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Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales)
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Draft genome sequences of strains CBS6241 and CBS6242 of the basidiomycetous yeast Filobasidium floriforme
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