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Dan Rokhsar
… Publications … Selected Publications …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in name first … 20% to 40% of the microbes are infected at any given time. Microbial viruses can thus have significant impacts on the …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … has changed our understanding of the microbiome and the microbial sciences field. Roux will be recognized at the … His project, “Characterizing Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria … they belong. This study provides further insights into the microbial involvement in carbon and nitrogen cycling and … like UniProt, exist, are not specific enough for a microbial community like that from a temperate coniferous …
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IMG Webinar Series
… Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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Hiroshi Otani
… H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 … Publications …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy …
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Graduate Students Get Thesis Research Opportunity at the JGI
… to an exceptional caliber of scientists.” For her project, “Microbial Community Structure and Methane Production in … Susannah Tringe, JGI’s User Programs deputy and head of the Microbial Systems group. Tringe’s research group focuses on … , in collaboration with computational biologist Dylan Chivian and other KBase team members at Lawrence Berkeley …
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Katherine Louie
… Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly. Nat Microbiol. 2018;3: … Selected Publications …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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Tracking the Origins of Methane-Producing Microbes
… recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … Following that work, they partnered once more with JGI Microbial Program head Tanja Woyke and her Single Cells team member Frederik Schulz to screen the microbial communities collected. The team noticed some of …
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A Powerful Technique to Study Microbes, Now Easier
… to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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