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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into … vital ecosystems. Peat bogs have two distinct zones: Hummocks and hollows flow like hills and valleys, on a smaller … was possibly driven by genetics, or even temperature. By sequencing the genome, researchers were able to pinpoint …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … using a DNA-based array developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics …
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The Integrated Microbial Genome Resource of Analysis
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A Comparison of Microbial Genome Web Portals
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Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship … Overall, our aim is to inspire students and established professionals to explore opportunities in STEM by providing … The JGI and UC Merced have had a long-standing internship partnership that started in the summer of 2014. …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein …
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Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for … I got to work with an enormous set of fungal genomics data. For me, it was an opportunity to adapt my existing …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into … gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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