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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate … challenges they overcame, and what new skill sets they look forward to taking back to school.  The interns from this … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for recycling. But some hungry insects can digest plastic. …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from … industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Party in the Rhizosphere
There’s a party in the soil, and microbes are the VIPs. They’re feasting on the compounds that plants secrete through their … rhizosphere. In this episode, biologist Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop … Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, when they set out to …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity.  …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Viruses Reprogram Cells into Different Virocells
… it no longer looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and the University of Michigan studying how virus infections cause significant … infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient …
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