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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … (and cone snails in general) outside of mostly anecdotal information,” Ul-Hasan noted. “I spent a good portion of 2016 …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … work, he established an efficient switchgrass transformation pipeline and, in collaboration with industrial … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for … are invited. Check back for more details and registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user …
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I-Min (Amy) Chen
Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was … JGI staff. According to Axel Visel and Zhong Wang, founders of this internship program, this was the largest turnout for …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model … Marchantia  and in flowering plant lineages.   With the information about  Marchantia -specific innovations and …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … individual genome highlighting the fact that the genetic information in a single reference genome is insufficient. “We …
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Access to Rock Star Scientists
Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The … their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has …
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