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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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JGI@25: Studying Sorghum’s Survival Skills
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … the world, sorghum’s potential to adapt and thrive in our changing climate has earned it a place on the JGI’s …
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The JGI Data Portal: Improving User Experience
… around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases … more findable and easier to download is a complex one, so our joint team started small, in the tradition of agile … download) or uncached (archived) The ability to send yourself a calendar reminder to download restored files …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the … albeit rather weakly. Further investigation on the source of controversy revealed that the branches among …
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Katherine Louie
… biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and Chemical Engineering.  DOI: …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… food webs in cold, but fecund polar waters. “A lot of our food comes from the North Atlantic, North Pacific and … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and gene expression. Sailing from pole to pole on four research cruises, they dipped their self-closing …
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Neha Varghese
… JGI’s user community. She also provides support for user science and projects through implementation of advanced …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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