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Draft Genome Sequence of Frankia Strain G2, a Nitrogen-Fixing Actinobacterium Isolated from Casuarina equisetifolia and Able To Nodulate Actinorhizal Plants of the Order Rhamnales
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
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Gene Expression: From On-Off Switch to Dial
… systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … results show that this singular library synthesized by JGI was versatile enough for use in multiple applications. …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next … vegetation. In return for their services, bees eat plant nectar and pollen. Nectar is an easily absorbable solution of sugars. But pollen contains plant cell walls, which have complex, branching chains of …
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Accelerating Metagenomics Discoveries with Deep Learning
… the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free … order to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists …
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Evolution of a Fungal Gene Expression Regulator
… than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … Robert Schmitz at the University of Georgia and including JGI researchers conducted the largest analysis to date of …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant microbiome. They also took …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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Green Algae Reveal One mRNA Encodes Many Proteins
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Tracking the Origins of Methane-Producing Microbes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the Emerging … (ETOP). Following that work, they partnered once more with JGI Microbial Program head Tanja Woyke and her Single Cells …
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