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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … environments without oxygen through a process called methanogenesis. Methanogenic microorganisms therefore play a … thought to be the only microorganisms capable of methanogenesis —  it’s the metabolic process these little makers …
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Toward More Efficient Artificial Photosynthesis
… carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims to develop an … Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA Carboxylase/Reductase (ECR) … in a cell, from capturing and fixing carbon dioxide to generate multi-carbon compounds through a light-driven …
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New Research Sheds Light on Diversity in the Deep Sea
… conditions. They identified 511 new or recently discovered genera of bacteria and archaea. Many of the samples shared a high prevalence of genes involved in sulfur and nitrogen metabolism, as well as …
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Cataloging the Microbes that Manage the Health of River Systems
… resource that provides information at multiple scales from genes to the community level. The Impact Rivers are … sampling locations. Metatranscriptomic information was also generated. The 3.8 trillion bases or Terabases of sequencing …
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Honey Bee Gut Microbiota Divvy Up Dinner
… — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In return for their … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… loss of cell walls and a complex pattern of evolution for genes related to eating plant compounds in both the oceanic …
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Building Sphagnum Genomic Resources
… and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and … species encode a sulfate reduction pathway, but also have genes for sulfide oxidation. The findings lead them to …
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JGI@25: Building a Better Bean
… was published online June 8, 2014 in the journal Nature Genetics . “Common beans are a major societal crop for those … 473-million basepair genome of the common bean, identifying genes related to disease-resistance, flowering time, … dicot,” Schmutz explained, meaning the plant’s reduced genetic diversity makes it easier to genetically manipulate. …
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Cultivating Symbiotic Antarctic Microbes
… lifestyles found in the Antarctic lakes and offers a genetically-tractable model system that could help … was discovered with proteomic analyses. The species harbors genes encoding SPEARE proteins—which contain  s erine  p …
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Taking Stock of the Known and Unknown Microbial Space
… biodiversity. Using publicly available genome sequence data generated over the past three decades, their study assesses … the estimated diversity of Bacteria and Archaea With phylogenetic diversity standing in as a representative measure of … they used five universally conserved, protein-coding marker genes on nearly 2 million genomes, including isolates, …
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Frederik Schulz
… . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz …
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