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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … ecosystems and organisms than ever before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, … Podcasts ,  Spotify or wherever you get your podcasts) Microbial ecologist and JGI user Trina McMahon has been …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole
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Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
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Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean
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Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables
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Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina)
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Metagenomics Reveal Dynamic Coastal Ocean Reservoir of Antibiotic Resistance Genes
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A Powerful Technique to Study Microbes, Now Easier
… Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Volland and colleagues, including researchers at the JGI and Berkeley Lab, LRC, and at the Université des … in coastal sediments,” said Woyke, who also heads the JGI’s Microbial Program and is one of the article’s senior …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 …
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