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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … mutant library in Chlamy, as the alga is colloquially known by researchers. A missing gene from this mutant library … reaction networks, and also assessing the role of viruses in the soil microbiome. Another accepted proposal in …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically … DNA (ssDNA). The discovery was made possible by mining the datasets in the Integrated Microbial Genomes … elements by incorporating short sequences from infecting viruses and phages. In the event of a new infection, the …
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic … regulation, abiotic stress tolerance, and the mechanisms by which plants interact with their microbiomes. In …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on … our seven science program — their areas of focus, major initiatives and more.  … formulation and implementation of scientific policy, engaging in interactions with the scientific community at large. …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … in human and mouse triglyceride metabolism. He is funded by DOE and through continued competitive grant support from … Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies … November 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and Juna Lee developed two …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics … of them. A: Watch the video (above) for the answer provided by Sara 4.  Q(uestion): Are all CSP produced data … and share data in PhycoCosm. For genomes not sequenced by JGI, if PIs are interested are working with us please …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This … program manager for  Sustainable Berkeley Lab (SBL). By 2030, Berkeley Lab  aims to cut its greenhouse gas … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … resources. Q:  Where can I get information for funding by JGI? A: The JGI is not a funding organization. Rather, it … Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile for a not very well …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA … Ian Blaby on Google Scholar Grosjean et al ., A hemoprotein with a … from Chlamydomonas reinhardtii reveals continuous cell and metabolic differentiation. The Plant Cell . 27: 10, …
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