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JGI Hosts GPU Hackathon in May
… in graphical processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by … JGI hackathon is particularly focused on developing bioinformatics applications instead of on simulation codes. “JGI … sure our computational workload can leverage future HPC systems – our data and compute challenges aren’t getting any …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids … of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. Dr. Charles Gawad has been supported for this work …
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Understanding Wildfire Recovery, Starting in Soil
The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … within the soil. To get a clearer picture of how burned ecosystems return to health, researchers have taken a look at … a recovering soil microbiome provides a window into how to model and track the forest recovery process.  Summary Most …
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 … to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  published in  New Phytologist , … different locations. They sampled soils in four forest ecosystems, extracted RNA to understand gene expression, and …
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Complete genome sequence of the moderately thermophilic mineral-sulfide-oxidizing firmicute Sulfobacillus acidophilus type strain (NALT)
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Moderate High Temperature is Beneficial or Detrimental Depending on Carbon Availability in the Green Alga Chlamydomonas reinhardtii
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Supercharging Carbohydrate Binding Module Alone Enhances Endocellulase Thermostability, Binding, and Activity on Cellulosic Biomass
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Microbial sensitivity to temperature and sulfate deposition modulates greenhouse gas emissions from peat soils
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Serendipita Fungi Modulate the Switchgrass Root Transcriptome to Circumvent Host Defenses and Establish a Symbiotic Relationship.
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Arabidopsis C‐terminal binding protein ANGUSTIFOLIA modulates transcriptional co‐regulation of MYB46 and WRKY33
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from the ACTIVE SITES Research Center (ACSI), the Centre for Water and Environmental Research (ZWU) of the University … of topics related to structural biology, single cell and systems biology, omics, and big data science, machine … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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