Results

Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
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Doubling Down on Known Protein Families
… through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … sequences evaded classification. Researchers also tried to hone in on the function of the genes via 3D modeling, and …
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Transcriptional responses of the marine green alga Micromonas pusilla and an infecting prasinovirus under different phosphate conditions
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Phosphate limitation responses in marine green algae are linked to reprogramming of the tRNA epitranscriptome and codon usage bias
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … ASM Microbe Meeting in Los Angeles, Calif.  Roux is also one of the lead organizers of the Viral EcoGenomics & … microbes and influence how soil ecosystems function. He was one of the eight JGI researchers on the 2023 Highly Cited …
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A single-cell genomics pipeline for environmental microbial eukaryotes
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Reference genome sequence of the model plant Setaria
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The Cassava Genome: Current Progress, Future Directions
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