Results

The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … above all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship … of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted on one or few genomes, but Wint’s …
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Uri Neri
… viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative …
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De novo Nanopore read quality improvement using deep learning
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a … and Oregon counties. It has been detected at scores of nurseries across the nation, elevating concerns about the … the California bay laurel. Because the oaks are considered “dead-end” hosts, he suggested that the epidemiology of the …
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