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Finding the Fermenters
… prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with little or no oxygen, life had … of these microbes. The Impact This study illustrates how the research community brings together the data …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and … function and activity of phytoplankton genes and looking at how communities of these microalgae interact, researchers … analysis as well as laboratory culture experiments showed that those zinc-binding proteins are important for …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland … nine other JGI users already serving on the UEC – go here to view the full roster of members. Each of the researchers … but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they inadvertently …
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JGI@25: The Little Alga That Could
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and … of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost …
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Products
… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE repository . Not all products are available …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The … of environments, including plants, soil, and the gut. To better understand the dynamics of this molecule, … cause metal corrosion in oil pipes. Scientists have tried to study cyclic di-GMP and cellular networks with …
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Alabama A&M Interns Access An Abundance of Knowledge
… and Alabama A&M University piloted an internship program to bring students to the JGI for research training experience. Enabled by the … CRISPR Cas9 knockout mutants to observe and investigate how transporter proteins regulate the production of root …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to … Jonelle Basso, Heejung Cho Project:  Characterizing how resident phages shape their host phenotype Graduate …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a … polymorpha. Commonly known as liverwort, this was done to gain insights into gene families involved in adaptations … mechanisms they had identified. For example, in comparing how liverwort and flowering plants had adapted to their …
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Tanja Woyke
… University Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. … position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and …
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Three Join the JGI User Executive Committee
… month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of … for the Ecological Society of America. He’s interested in how microbes influence biogeochemical cycles in soils and …
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Statement on the Use of Genomics Data
… of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data sharing to accelerate … current data policies for gaining a better understanding of how changes may affect data-producing users and other users. …
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