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Understanding Wildfire Recovery, Starting in Soil
… and Coniochaeata lignaria , and both DNA and RNA viruses. One trait that stood out in both bacteria and fungi … microbes that had not returned to the forest within this timeframe, namely, ectomycorrhizal fungi species that can … program, researchers leverage the capabilities of more than one DOE Office of Science National User Facilities in a …
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and …
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Three Join the JGI User Executive Committee
… investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Microbial co-habitation and lateral gene transfer: what transposases can tell us
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A More Intuitive Phytozome Interface
… foundation for Phytozome v10) back in 2014.  Several components of that codebase are no longer supported, and there … the active gene family version in v13 is different from the one in v12.  v12 Family pages will be forwarded to the  v13 … We hope to add several of them soon, but don’t yet have a timeline for their restoration. They include Jalview (for …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest honors! Tringe, a microbiologist, was …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two …
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Data Ecosystem
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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Digging into Microbial Ecosystems Deep Underground
… the pandemic, they took the JGI on a sampling field trip. One of the questions they’re looking at: the role viral …
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