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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The … unique traits in far-flung species would speed up efforts to harness species diversity in traits relevant to … and improve functional annotation to harness the genomic data. Reported October 8, 2018, in Nature Genetics , a team …
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Year in Review: JGI’s 2018 Progress Report Available Now
… is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon … by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can … more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This … -- more reproducible, more reusable, and more insightful, for the future of studying microbial communities.   …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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2022 Progress Report
… Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area …
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JGI on the 2021 Highly Cited Researchers List
… JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen … multi-institutional research team that combined field data with a reference switchgrass genome to associate … colleagues used an extensive JGI database to investigate viruses detected in the samples. Simon Roux co-organized the …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… which could then be converted into sustainable biofuels . For its importance to the DOE mission, switchgrass is among … at the University of Texas at Austin produced a high-quality reference sequence of the complex switchgrass … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine … exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal also reviewed …
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Three Join the JGI User Executive Committee
… and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight other JGI users … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … she is committed to representing and advocating for early career users on the UEC. As a user of the JGI and …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate … it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …
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JGI announces 2025 Functional Genomics awardees
… Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who translate genomic information into biological function. Through our  CSP … program, these projects integrate cutting-edge genomic data with predictive modeling and bioengineering to advance …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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