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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in … T, et al. MAGI: A Method for Metabolite Annotation and Gene Integration. ACS Chem Biol. 2019;14: 704–714. 6. …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … properties, communities and ecosystems.” Building off multiple collaborations, Lab researchers working with the …
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Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics
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Accelerating Metagenomics Discoveries with Deep Learning
… rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of these …
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Tina Clarke
Sonoma State University. Early on Tina knew the importance of understanding human and group behaviors as her role in HR … respect and trust. Tina is very enthusiastic to be a part of the Berkeley Lab’s first Conflict Resolution Services … Era of Networks (Sybase Acquired Company), Pacheco, CA HR Generalist, 1999 – 2000 TriNet VCO, San Leandro, CA HR …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi … the Women in STEM campus organization and is involved with multiple outreach programs promoting the advancement of …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … to help researchers assess and improve the quality of metagenome-assembled viral genomes . The Impact The … perform functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps …
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Bioactive diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays)
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Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat
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Insights into the dynamics between viruses and their hosts in a hot spring microbial mat
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Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
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Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay
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