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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and … working on genomics data for a very long time, and it’s great to see how far the field has come from the early …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New …   Learn more about our individual calls and other opportunities to work with the JGI …
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The metagenomic basis of anammox metabolism in Candidatus ‘Brocadia fulgida’
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Creating a large designer cellulosome in yeast to boost ethanol production
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is … the most efficient at making proteins likely factors into why fungi have been so evolutionary and ecologically … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have … that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell wall materials … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of …
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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
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Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment▿ †
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Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri
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Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing
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