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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, … team, which included scientists from Oak Ridge National Laboratory and the U.S. Department of Energy (DOE) Joint … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope … the forefront.” Mentors: Rex Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, provided sequence resources — including the …
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship program to bring … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … experience in molecular biology and plant functional genomics, because this work is essential for improving crop …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are developing and applying laboratory ecosystems to help transition microbiome science … studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that … as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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John Vogel
Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … an efficient switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of …
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Jeremy Schmutz
… involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human Genome … human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … produced by the DOE Joint Genome Institute and the collaborative projects funded through the CSP program. In …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in … Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor them. …
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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” … JGI is partnering with NVIDIA and Oak Ridge National Laboratory (ORNL) to make sure our computational workload …
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