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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science The humble lichen is a … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens …
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Desert truffle genomes reveal their reproductive modes and new insights into plant–fungal interaction and ectendomycorrhizal lifestyle
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Contrasting Modes of Mitochondrial Genome Evolution in Sister Taxa of Wood-Eating Marine Bivalves (Teredinidae and Xylophagaidae)
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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical … fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy … are strongly sorbed to the clays. Sandy soils are much more likely to work well for metabolomics.  Q:  What tool or … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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An Automated Tool for Assessing Virus Data Quality
… in sequencing technologies and computational approaches, more and more virus sequences are being recovered and … have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for our 2025 … Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … and nutrient cycling, and biogeochemistry.  You can learn more about this call, as well as our smaller-scale New …
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … enzymes are an optimal study subject that could lead to more sustainable energy production.  However, less than 10% … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their …
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Virus-Microbe Interactions of Mud Island Mangroves
… program , which awards graduate students the opportunity to pursue part of their thesis research at one of the DOE … collected on Mud Island – “it’s essentially a mud island, more or less, right?” – off the coast of south Texas. At the … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and …
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