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Individual genome assembly from complex community short-read metagenomic datasets
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User Support Analysis Group
We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … ripples through the trees in his backyard. Originally from northern California and one of the first students to … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Eelgrass Proves to Be Much Younger Than We Thought
The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … years ago, when eelgrass traveled across the ocean current from Japan to colonize the southern California and Mexican … changes in protein sequences, while others analyzed single point mutations across the genome or changes to the …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … scientific journal. It was gratifying to see the empowerment displayed across each of their faces.” …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the side … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck Institute in Hanover, Germany, where he … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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Genetic isolation between two recently diverged populations of a symbiotic fungus
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Morphological and Genomic Features of the New Klosneuvirinae Isolate Fadolivirus IHUMI-VV54
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Genome Sequences of Two Carbapenemase-Resistant Klebsiella pneumoniae ST258 Isolates
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Forest Fungi, Seagrass, and a New View of Symbiosis
… research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of … Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen Serrano and Benjamin …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth … 27-year history. He has a wealth of managerial experience from almost 20 years in the Industrial Biotechnology private … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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