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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. …
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A Grass Model to Help Improve Giant Miscanthus
Analysis of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … is a tetraploid, with four sets of chromosomes; the study showed that these sets descend from two now-extinct …
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NeLLi — Symposium on New Lineages of Life
… expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases cutting-edge experimental approaches, computational …
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Doubling Down on Known Protein Families
… approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room … to see beyond the beam — worse, they didn’t even know how big the room is.  A new study  published online Oct. 11, … families. From there they focused on families with at least 100 members.  “If you have 100 sequences, the quality of the …
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JGI-UC Merced Interns Share Their 2021 Experiences
… the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, …
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Alabama A&M Interns Access An Abundance of Knowledge
… for research training experience. Enabled by the DOE RENEW initiative, undergraduate student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI … CRISPR Cas9 knockout mutants to observe and investigate how transporter proteins regulate the production of root …
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Progress Reports: 2002–2020
Click the cards below to view downloadable pdfs of previous Progress Reports from the … Report … FY12 Progress Report … FY11 Progress Report … FY10 Progress Report … FY09 Progress Report … FY08 Progress …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … (Berkeley Lab). Transcription factors control when and how genes are turned on or off, so transcriptional … addressed in the study were found to control more than 100 genes, one of which was directly characterized by …
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David Goodstein
With a background in experimental and computational surface … efforts expanded to include basal metazoans and plants. Working with a talented team of scientists and software engineers, …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
A zoo once offered a coloring book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers … will be able to estimate the actual size of the RNA virome However, this is now real Big Data, we are dealing with …
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JGI Early Career Researchers Featured in mSystems Special Issue
… , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation could look like. In … before sequencing to recover rare microbes. The technique was applied to a recent Nature Communications paper, …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the world … physiologically and enzymatically, with descriptions of how their activities influence biochemical reactions. For … combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …
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