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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. … now IGB-wide ZERO Waste Initiative began its most ambitious project yet: a special recycling program to recycle lab … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … of Brachypodium distachyon root transporters in plant-microbiome interactions ” Cory-James Pugne-Andenoro : “The …
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth … what might happen for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon compound that plays an essential role. But other plants, which do CAM, can kind of clam up …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have … into sustainable biofuels . For its importance to the DOE mission, switchgrass is among the JGI Flagship Plants . … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers … (BGCs). BGCs make diverse molecules of value to both human and ecosystem health. But bacteria often fail to … have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied and Environmental …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … done by the Banfield lab in collaboration with the JGI), human microbiomes, natural oil seeps in Santa Barbara, Calif., and … Contract No. DE-AC02-05CH11231. Support was provided by the DOE and the National Institutes of Health, and the DFG. …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day … genomics studies, offering insight into genes critical for roles including plant growth and cell wall development.  M. … , a project supported by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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