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Eelgrass Proves to Be Much Younger Than We Thought
The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina and other …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … fellow in the Juenger lab and continues to work on the project from a lab at Michigan State University that is …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by short final … one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by …
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Back to the Future! A Sorghum Story
You might know sorghum as an edible grain. But there are some sorghum varieties, grown on marginal land with little water, which were developed … sorghum’s historical — and literal — roots could play a big role in our energy future. …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a … a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take …
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Gotta Catch 'Em Gall
Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So … In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our … challenges.   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions … into biochemical production.    Over time, as these projects have delivered results, they have also snowballed …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent … virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … Transcriptomes of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage …
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to promote … spoke briefly about their internship experiences at the DOE JGI – revisit their videos at …
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Accelerating Metagenomics Discoveries with Deep Learning
Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … to climate shifts. Changes in ploidy might play a key role in this response. Generating additional genomic …
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