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The JGI Data Portal: Improving User Experience
… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience … Phytozome , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers with unique areas of focus and data and …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as … As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper at The University of Texas at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution
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Transcription Factor Amr1 Induces Melanin Biosynthesis and Suppresses Virulence in Alternaria brassicicola
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the journal Science. It …
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Experimental Evolution of Extreme Resistance to Ionizing Radiation in Escherichia coli after 50 Cycles of Selection.
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers … into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director Nigel … — a proof-of-principle for investigating plant-microbe interactions. A final recent advance in CRAGE is the …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains … As  reported August 26, 2021, in  Nature Communications , researchers led by Hal Alper at The University of Texas at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
Learn more
Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the … Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years after the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Coordinating Environmental Genomics and Geochemistry Reveals Metabolic Transitions in a Hot Spring Ecosystem
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Functional Metagenomics of Spacecraft Assembly Cleanrooms: Presence of Virulence Factors Associated with Human Pathogens
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