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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in … today. I didn’t know anything about Principal Component Analysis (PCAs) when I first started, and overall found …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science … hosted two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal portal PhycoCosm. …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome … Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar algae. They … expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture experiments showed … collaboration with the JGI Algal Program, which explores genomics of algal diversity and biology to support basic …
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Neha Varghese
… benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. … science and projects through implementation of advanced analysis pipelines and tools as well as development and …
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Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of … – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – has advanced … work here . Edward Holmes, University of Sydney Using protein structures to assess scope of the virosphere Keynote …
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Complete genome sequence of Haliscomenobacter hydrossis type strain (OT)
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as … hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence Berkeley National Laboratory … Her lab has leveraged bioinformatics in computational analysis to identify and characterize TEs, developing …
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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey
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