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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid … relationships than other algae, Auxenochlorella ’s reduced genomic complexity can accelerate the design-build-test …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, … novel flow cytometry protocols for targeted recovery of specific microbes. …
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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from around the world. By … 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in … alumni, and other staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate … impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The Blob, …
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Accelerating Metagenomics Discoveries with Deep Learning
… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … Research (BER) missions. The JGI provides advanced genomic capabilities, large-scale AI-ready data and expertise to the global research community to study …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To … to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . <span data-mce-type="bookmark" style="display: inline-block; …
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Frederik Schulz
… Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … call recommended including plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a … University of Minnesota to establish the Natural Products Genomics Resource Center. To help enable the discovery of …
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