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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene … CRAGE, researchers are no longer limited to using model host microbes; theoretically, any microbe can serve as the … Lab) can then employ CRISPR in a variety of microbial hosts. Summary Photorhabdus luminescens proves fatal to …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs … elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or … of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included …
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Maureen Berg
… Maureen is currently developing new high-resolution and high-throughput methods to link uncultivated viruses to their host. With these new methods, she hopes to expand our …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust … containers into sea water to sample algal communities along transects in the Arctic Ocean, North Atlantic Ocean, … done through the JGI Community Science Program . Using an ecology metric called beta diversity, the team observed that …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome … has to go into the plant, out through the roots, into the soil, and then picked up by the rhizosphere, then that takes … experiment, and if so–how do you resolve root respiration/soil respiration vs plant CO2 uptake? A:  We’ve accomplished …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient … which in turn can help to understand its impact on climate along earth history.” Marker genes for diverse methane … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he … for Science where he studied the molecular basis of a plant host’s susceptibility to pathogens. Dr. Vogel’s current … Brachypodium distachyon is a small annual grass that is well …
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