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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Shoring up the base: the development and regulation of cortical sclerenchyma in grass nodal roots
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Synthase-selected sorting approach identifies a beta-lactone synthase in a nudibranch symbiotic bacterium
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… The practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily … soil enrichment, is partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Building Wet and Dry Lab Skills
… Summer 2025 marked the second year of Alabama A&M University students coming to the DOE Joint … Want to learn more about their experience? Watch the short video below:  Video Transcript: Zyiah Mikes : Hi. My … lab. We've been focused on analyzing plant microbiome data using different programming languages such as Python, Bash, …
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Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells
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Visualizing in situ translational activity for identifying and sorting slow-growing archaeal−bacterial consortia
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The Genetic Architecture of Shoot and Root Trait Divergence Between Mesic and Xeric Ecotypes of a Perennial Grass
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Alabama A&M Interns Access An Abundance of Knowledge
… mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … alike. Want to learn more about their experience? Watch the short video below. Video Transcript: Ti’Yanna Watson : Hi, … is Dr. Yi Zhai, and I’m currently working on the effect of plant root exudates in the rhizosphere and microbiome. …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … Science Program . The metagenomes were also processed using the JGI-developed software suite, BBTools , and …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … especially relevant to living on a changing planet. In this short audio production, we’ll hear from Ed Hall, an … the world’s rivers and their microbial communities. He’s focusing on the Arkansas River and how microbes might be …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … meal. In their evolutionary history, these fungi branched off early from aerobic fungi, which can breathe oxygen — … source of antibiotics. Indeed, these anaerobic fungi may be using these compounds for self-defense. But the compounds …
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