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Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint … researchers to discover novel lineages of life and move from the identification of microbial novelty to assigning … Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) … Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … biology tools that can help produce value-added products from these systems. He’s worked with the JGI on various CSP …
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video … measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against … revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … ability make zealexins, and harnessed gene expression data from these lines to identify genes associated with zealexin …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … Horonobe Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual …     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …
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Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
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