Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae
Results
GenomeVISTA—an integrated software package for whole-genome alignment and visualization
Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
CheckV assesses the quality and completeness of metagenome-assembled viral genomes
RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach
A versatile toolkit for high throughput functional genomics with Trichoderma reesei
The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species
acCRISPR: an activity-correction method for improving the accuracy of CRISPR screens
GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
