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How Microbes Can Protect Plants in Drier Straits
… at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient …
Learn more
JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses …
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Mapping Heat Resistance in Yeasts
… in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping strategy … yeast Saccharomyces cerevisiae , allowing this species to grow better than its closest relative S. paradoxus at … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence …
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Georg Rath
… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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A Powerful Technique to Study Microbes, Now Easier
… Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots have made these experiments easier …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the …
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JGI-KBase Panel at SACNAS
… for Scientific Contributions of Any Size What is considered to be a scientific contribution? This session will demonstrate to students (and their mentors) how to begin establishing a … credit for their contributions to science. A panel of DOE researchers, program managers, and intern alumni will …
Learn more
The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of … and new analysis methods are bringing this mobilome into light, and opening up new options for engineering these … Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time series …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to more researchers. Ultimately, the goal is to generate SIP data …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome … platform — has been developed to help inform scientists and researchers more about the patterns and functions of … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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